Publications

(* stands for equal contribution)

Pre-prints

• Gophormer: Ego-Graph Transformer for Node Classification
  Jianan Zhao*, Chaozhuo Li, Qianlong Wen*, Yiqi Wang, Yuming Liu, Hao Sun, Xing Xie, Yanfang Ye
  Arxiv Preprint, 2021

Conference Papers

• From Coarse to Fine: Enable Comprehensive Graph Self-supervised Learning with Multi-granular Semantic Ensemble
  Qianlong Wen, Mingxuan Ju, Zhongyu Ouyang, Chuxu Zhang, Yanfang Ye
  [ICML’24] International Conference on Machine Learning

• GCVR: Reconstruction from Cross-View Enable Sufficient and Robust Graph Contrastive Learning
  Qianlong Wen, Zhongyu Ouyang, Chunhui Zhang, Yiyue Qian, Chuxu Zhang, Yanfang Ye
  [UAI’24] Uncertainty in Artificial Intelligence

• A Multi-Modality Framework for Drug-Drug Interaction Prediction by Harnessing Multi-source Data
  Qianlong Wen, Jiazheng Li, Chuxu Zhang, Yanfang Ye
  [CIKM’23] The ACM International Conference on Information and Knowledge Management

• When sparsity meets contrastive models: less graph data can bring better class-balanced representations
  Chunhui Zhang, Chao Huang, Yijun Tian, Qianlong Wen, Zhongyu Ouyang, Youhuan Li, Yanfang Ye, Chuxu Zhang
  [ICML’23] International Conference on Machine Learning

• Multi-task Self-supervised Graph Neural Networks Enable Stronger Task Generalization
  Mingxuan Ju, Tong Zhao, Qianlong Wen, Wenhao Yu, Neil Shah, Yanfang Ye, Chuxu Zhang
  [ICLR’23] International Conference on Learning Representations

• Self-Supervised Graph Structure Refinement for Graph Neural Networks
  Jianan Zhao*, Qianlong Wen*, Mingxuan Ju, Yanfang Ye, Chuxu Zhang
  [WSDM’23] The ACM International Conference on Web Search and Data Mining

• Disentangled Dynamic Heterogeneous Graph Learning for Opioid Overdose Prediction
  Qianlong Wen, Zhongyu Ouyang, Jianfei Zhang, Yiyue Qian, Yanfang Ye, Chuxu Zhang
  [KDD’22] The ACM SIGKDD Conference on Knowledge Discovery and Data Mining

• Rep2Vec: Repository Embedding via Heterogeneous Graph Adversarial Contrastive Learning
  Yiyue Qian, Yiming Zhang, Qianlong Wen, Yanfang Ye, Chuxu Zhang
  [KDD’22] The ACM SIGKDD Conference on Knowledge Discovery and Data Mining

• RxNet: Rx-refill Graph Neural Network for Overprescribing Detection
  Jianfei Zhang, Ai-Te Kuo, Jianan Zhao, Qianlong Wen, Erin Winstanley, Chuxu Zhang, Yanfang Ye
  [CIKM’21] The ACM International Conference on Information and Knowledge Management

• Multi-view Self-supervised Heterogeneous Graph Embedding
  Jianan Zhao, Qianlong Wen, Shiyu Sun, Yanfang Ye, Chuxu Zhang
  [ECML/PKDD’21] European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases

Journal Papers

• Clinical connectivity map for drug repurposing: using laboratory results to bridge drugs and diseases
  Qianlong Wen, Ruoqi Liu, Ping Zhang
  BMC Medical Informatics and Decision Making 21:263, 2021